Publications in OpenAlex of which a co-author is affiliated to this organization
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| Title | DOI |
|---|---|
| https://doi.org/10.1007/s00251-017-1023-5 | On the feasibility of mining CD8+ T cell receptor patterns underlying immunogenic peptide recognition |
| https://doi.org/10.1172/jci116653 | Locus heterogeneity of autosomal dominant long QT syndrome. |
| https://doi.org/10.1186/s13073-014-0074-6 | VariantDB: a flexible annotation and filtering portal for next generation sequencing data |
| https://doi.org/10.1097/mlr.0b013e318259c1e7 | Research Data Collection Methods |
| https://doi.org/10.1002/pmic.201300289 | Machine learning applications in proteomics research: How the past can boost the future |
| https://doi.org/10.1016/j.bcp.2016.03.026 | Withaferin A induces heme oxygenase (HO-1) expression in endothelial cells via activation of the Keap1/Nrf2 pathway |
| https://doi.org/10.1093/nar/gkv1251 | COLOMBOS v3.0: leveraging gene expression compendia for cross-species analyses: Table 1. |
| https://doi.org/10.1158/0008-5472.can-13-2150 | The Transcriptional Regulatory Network of Proneural Glioma Determines the Genetic Alterations Selected during Tumor Progression |
| https://doi.org/10.1371/journal.pone.0095527 | Dietary Flavanols Modulate the Transcription of Genes Associated with Cardiovascular Pathology without Changes in Their DNA Methylation State |
| https://doi.org/10.1097/01.ccm.0000281516.84767.96 | Workflow in intensive care unit remote monitoring: A time-and-motion study* |
| https://doi.org/10.1073/pnas.91.26.12525 | A mutation in ribosomal protein L9 affects ribosomal hopping during translation of gene 60 from bacteriophage T4. |
| https://doi.org/10.1002/pmic.201600159 | Computational quality control tools for mass spectrometry proteomics |
| https://doi.org/10.1261/rna.7810204 | Efficient stimulation of site-specific ribosome frameshifting by antisense oligonucleotides |
| https://doi.org/10.1016/j.vaccine.2018.09.001 | Transcriptome profiling in blood before and after hepatitis B vaccination shows significant differences in gene expression between responders and non-responders |
| https://doi.org/10.1371/journal.pcbi.1006018 | speaq 2.0: A complete workflow for high-throughput 1D NMR spectra processing and quantification |
| https://doi.org/10.1016/j.imbio.2013.07.004 | The role of monocytes in the development of Tuberculosis-associated Immune Reconstitution Inflammatory Syndrome |
| https://doi.org/10.1186/s13040-018-0181-9 | Grasping frequent subgraph mining for bioinformatics applications |
| https://doi.org/10.1073/pnas.0907564106 | Common variants on chromosome 2 and risk of primary open-angle glaucoma in the Afro-Caribbean population of Barbados |
| https://doi.org/10.1128/aac.04231-14 | Experimental Resistance to Drug Combinations in Leishmania donovani: Metabolic and Phenotypic Adaptations |
| Tourette symptoms in 161 related family members. | |
| https://doi.org/10.1097/pts.0b013e31823d8df0 | Creating an Oversight Infrastructure for Electronic Health Record–Related Patient Safety Hazards |
| https://doi.org/10.1007/s11306-013-0540-y | 1H-NMR study of the metabolome of a moderately hypoxia-tolerant fish, the common carp (Cyprinus carpio) |
| https://doi.org/10.1371/journal.pone.0113842 | Ectopic MicroRNA-150-5p Transcription Sensitizes Glucocorticoid Therapy Response in MM1S Multiple Myeloma Cells but Fails to Overcome Hormone Therapy Resistance in MM1R Cells |
| https://doi.org/10.1016/j.virol.2014.12.011 | Gairo virus, a novel arenavirus of the widespread Mastomys natalensis: Genetically divergent, but ecologically similar to Lassa and Morogoro viruses |
| https://doi.org/10.1213/ane.0000000000000716 | Data, Big Data, and Metadata in Anesthesiology |
| https://doi.org/10.1186/s40478-021-01121-w | Contribution of rare homozygous and compound heterozygous VPS13C missense mutations to dementia with Lewy bodies and Parkinson’s disease |
| https://doi.org/10.1007/3-540-45675-9_74 | Usage of New Information Estimations for Induction of Fuzzy Decision Trees |
| https://doi.org/10.1093/nar/gkt1086 | COLOMBOS v2.0: an ever expanding collection of bacterial expression compendia: Table 1. |
| https://doi.org/10.1542/peds.2019-0857 | CYP2C19 Phenotype and Risk of Proton Pump Inhibitor–Associated Infections |
| https://doi.org/10.1371/journal.pone.0226770 | MESSAR: Automated recommendation of metabolite substructures from tandem mass spectra |
| https://doi.org/10.1002/pmic.201400296 | Bioinformatics approaches for the functional interpretation of protein lists: From ontology term enrichment to network analysis |
| https://doi.org/10.1007/s00228-008-0591-6 | Clinical pharmacology of exogenously administered alkaline phosphatase |
| Recognizing and Encoding Disorder Concepts in Clinical Text using Machine Learning and Vector Space Model | |
| https://doi.org/10.1002/mas.21485 | Protein complex analysis: From raw protein lists to protein interaction networks |
| https://doi.org/10.1002/rcm.9120 | Current and future deep learning algorithms for tandem mass spectrometry (MS/MS)‐based small molecule structure elucidation |
| https://doi.org/10.1111/cge.12470 | Challenges and opportunities in the investigation of unexplained intellectual disability using family‐based whole‐exome sequencing |
| https://doi.org/10.1016/s1553-7250(13)39065-5 | Evaluation of a Problem-Specific SBAR Tool to Improve After-Hours Nurse-Physician Phone Communication: A Randomized Trial |
| https://doi.org/10.1021/acs.analchem.6b04310 | The Human Proteome Organization–Proteomics Standards Initiative Quality Control Working Group: Making Quality Control More Accessible for Biological Mass Spectrometry |
| https://doi.org/10.1016/j.trac.2019.115686 | Mass spectrometry-based structure elucidation of small molecule impurities and degradation products in pharmaceutical development |
| https://doi.org/10.1097/cmr.0000000000000044 | Radiation necrosis mimicking rapid intracranial progression of melanoma metastasis in two patients treated with vemurafenib |
| https://doi.org/10.1371/journal.pone.0088717 | Structural Properties of Prokaryotic Promoter Regions Correlate with Functional Features |
| https://doi.org/10.1093/bioinformatics/bty079 | pBRIT: gene prioritization by correlating functional and phenotypic annotations through integrative data fusion |
| https://doi.org/10.1038/s41435-018-0035-y | Memory CD4+ T cell receptor repertoire data mining as a tool for identifying cytomegalovirus serostatus |
| https://doi.org/10.4338/aci-2013-04-ra-0019 | Developing Software to “Track and Catch” Missed Follow-up of Abnormal Test Results in a Complex Sociotechnical Environment |
| https://doi.org/10.1080/15384101.2015.1044177 | DEK over-expression promotes mitotic defects and micronucleus formation |
| https://doi.org/10.1021/acs.jproteome.5b00127 | iMonDB: Mass Spectrometry Quality Control through Instrument Monitoring |
| https://doi.org/10.1093/humrep/dez248 | Oocyte maturation under lipotoxic conditions induces carryover transcriptomic and functional alterations during post-hatching development of good-quality blastocysts: novel insights from a bovine embryo-transfer model |
| Determining Onset for Familial Breast and Colorectal Cancer from Family History Comments in the Electronic Health Record. | |
| Lack of association of diagonal earlobe crease with other cardiovascular risk factors. | |
| https://doi.org/10.7554/elife.68388 | Preexisting memory CD4 T cells in naïve individuals confer robust immunity upon hepatitis B vaccination |
| https://doi.org/10.1021/acs.jproteome.2c00632 | Unified and Standardized Mass Spectrometry Data Processing in Python Using spectrum_utils |
| https://doi.org/10.4338/aci-2011-11-ra-0066 | Clinical Summarization Capabilities of Commercially-available and Internally-developed Electronic Health Records |
| https://doi.org/10.1111/pce.14147 | Arabidopsis root growth and development under metal exposure presented in an adverse outcome pathway framework |
| https://doi.org/10.1111/j.1349-7006.2009.01468.x | High frequencies of less differentiated and more proliferative WT1‐specific CD8+ T cells in bone marrow in tumor‐bearing patients: An important role of bone marrow as a secondary lymphoid organ |
| https://doi.org/10.1542/peds.2019-2400 | Increasing Physician Reporting of Diagnostic Learning Opportunities |
| https://doi.org/10.1371/journal.pone.0072145 | Seasonal, Diurnal and Vertical Variation of Chlorophyll Fluorescence on Phyllostachys humilis in Ireland |
| https://doi.org/10.1542/peds.2020-034603 | Optimizing Situation Awareness to Reduce Emergency Transfers in Hospitalized Children |
| https://doi.org/10.1016/j.tim.2022.07.008 | T cell immunity in HSV-1- and VZV-infected neural ganglia |
| https://doi.org/10.1021/acs.jproteome.5b00666 | SFINX: Straightforward Filtering Index for Affinity Purification–Mass Spectrometry Data Analysis |
| https://doi.org/10.1016/j.procs.2011.04.015 | A Parallel Graph Sampling Algorithm for Analyzing Gene Correlation Networks |
| https://doi.org/10.1021/acs.jproteome.6b00028 | Unsupervised Quality Assessment of Mass Spectrometry Proteomics Experiments by Multivariate Quality Control Metrics |
| https://doi.org/10.4161/rna.8.4.15395 | Programmed ribosomal frameshifting in the expression of the regulator of intestinal stem cell proliferation, adenomatous polyposis coli (APC) |
| Clinical Acronym/Abbreviation Normalization using a Hybrid Approach. | |
| https://doi.org/10.1016/j.jprot.2011.03.023 | Unraveling tobacco BY-2 protein complexes with BN PAGE/LC–MS/MS and clustering methods |
| https://doi.org/10.1353/hpu.2015.0119 | Effects of Health Insurance on Tumor Stage, Treatment, and Survival in Large Cohorts of Patients with Breast and Colorectal Cancer |
| https://doi.org/10.1542/hpeds.2020-000174 | Declaring Uncertainty: Using Quality Improvement Methods to Change the Conversation of Diagnosis |
| https://doi.org/10.3390/vaccines9030270 | HLA-DRB1 Alleles Associated with Lower Leishmaniasis Susceptibility Share Common Amino Acid Polymorphisms and Epitope Binding Repertoires |
| https://doi.org/10.3389/pore.2022.1610423 | NTRK Fusions in a Sarcomas Series: Pathology, Molecular and Clinical Aspects |
| https://doi.org/10.1021/acs.jproteome.2c00616 | Semisupervised Machine Learning for Sensitive Open Modification Spectral Library Searching |
| https://doi.org/10.1371/journal.pcbi.1005226 | Ten simple rules for forming a scientific professional society |
| https://doi.org/10.1093/europace/euad122.550 | Validation of Polar H10 chest strap and Fitbit Inspire 2 tracker for measuring continuous heart rate in cardiac patients: impact of artefact removal algorithm |
| https://doi.org/10.3390/v14112517 | Activation of Interferon-Stimulated Genes following Varicella-Zoster Virus Infection in a Human iPSC-Derived Neuronal In Vitro Model Depends on Exogenous Interferon-α |
| https://doi.org/10.1093/bib/bbae602 | tcrBLOSUM: an amino acid substitution matrix for sensitive alignment of distant epitope-specific TCRs |
| https://doi.org/10.12688/f1000research.10420.1 | ISCB-Student Council Narratives: Strategical development of the ISCB-Regional Student Groups in 2016 |
| https://doi.org/10.1136/bmjophth-2020-000639 | Interests and needs of eye care providers in clinical decision support for glaucoma |
| https://doi.org/10.1016/j.celrep.2024.114062 | Lack of functional TCR-epitope interaction is associated with herpes zoster through reduced downstream T cell activation |
| https://doi.org/10.1021/acs.jcim.4c01102 | Semisupervised Learning to Boost hERG, Nav1.5, and Cav1.2 Cardiac Ion Channel Toxicity Prediction by Mining a Large Unlabeled Small Molecule Data Set |
| https://doi.org/10.1007/978-1-0716-0327-7_13 | Identification of Epitope-Specific T Cells in T-Cell Receptor Repertoires |
| https://doi.org/10.3389/fimmu.2023.1177245 | Lack of strong innate immune reactivity renders macrophages alone unable to control productive Varicella-Zoster Virus infection in an isogenic human iPSC-derived neuronal co-culture model |
| https://doi.org/10.1126/sciadv.adr3196 | T cell receptor–centric perspective to multimodal single-cell data analysis |
| https://doi.org/10.1016/j.diagmicrobio.2021.115613 | Comparison of the QuantiFERON-TB® Gold Plus on LIAISON® XL and T-SPOT.TB for the diagnosis of latent Mycobacterium tuberculosis infection in a low tuberculosis incidence population |
| https://doi.org/10.1002/stvr.1865 | Mutation testing optimisations using the Clang front‐end |
| https://doi.org/10.1177/20552076251337598 | Continuous heart rate measurements in patients with cardiac disease: Device comparison and development of a novel artefact removal procedure |
| https://doi.org/10.1093/ehjdh/ztaf084 | Optimization and pre-use suitability selection for wrist photoplethysmography-based heart rate monitoring in patients with cardiac disease |
| https://doi.org/10.1021/acsptsci.5c00482 | Lands’ Cycle at the Crossroads: Phospholipid Remodelling, Oxidative Stress, Cellular Toxicity, and Therapeutic Targeting |
| https://doi.org/10.1021/acsomega.5c08750 | NSAIDs beyond COX: In Silico and In Vitro Insights into Acetylcholinesterase Modulation |
| https://doi.org/10.1073/pnas.070055897 | Discovery of a spermatogenesis stage-specific ornithine decarboxylase antizyme: Antizyme 3 |
| https://doi.org/10.1146/annurev.ne.16.030193.001151 | The Neurofibromatosis Type 1 Gene |
| https://doi.org/10.1146/annurev.ge.25.120191.001221 | TOWARDS A GENETIC DISSECTION OF THE BASIS OF TRIPLET DECODING, AND ITS NATURAL SUBVERSION: Programmed Reading Frame Shifts and Hops |
| X-linked inheritance of Alport syndrome: family P revisited. | |
| NAT2, GSTM-1, cigarette smoking, and risk of colon cancer. | |
| A gene for familial total anomalous pulmonary venous return maps to chromosome 4p13-q12. | |
| https://doi.org/10.1073/pnas.95.22.13042 | Detection of targeted GFP - Hox gene fusions during mouse embryogenesis |
| https://doi.org/10.1073/pnas.96.25.14177 | Programmed ribosomal frameshifting: Much ado about knotting! |
| https://doi.org/10.1055/s-0037-1615894 | Hereditary Thrombophilia as a Model for Multigenic Disease |
| https://doi.org/10.1353/hub.2004.0003 | Genetics and Population History of Caucasus Populations |
| https://doi.org/10.1073/pnas.94.9.4582 | A steroid-triggered switch in E74 transcription factor isoforms regulates the timing of secondary-response gene expression |
| https://doi.org/10.2337/diacare.24.3.472 | Role of Common Sequence Variants in Insulin Secretion in Familial Type 2 Diabetic Kindreds |
| Tabulations and expectations regarding the genetics of human hypertension. | |
| The genetic structure of the Utah Mormons: migration analysis. |