Publications in OpenAlex of which a co-author is affiliated to this organization
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| Title | DOI |
|---|---|
| https://doi.org/10.1038/nmeth.4463 | SCENIC: single-cell regulatory network inference and clustering |
| https://doi.org/10.1038/nature10144 | Molecular mechanisms and clinical applications of angiogenesis |
| https://doi.org/10.1016/s0140-6736(15)01124-1 | Alzheimer's disease |
| https://doi.org/10.1126/science.1261359 | Structure and function of the global ocean microbiome |
| https://doi.org/10.1016/j.cell.2011.08.039 | Basic and Therapeutic Aspects of Angiogenesis |
| https://doi.org/10.1080/15548627.2020.1797280 | Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1 |
| https://doi.org/10.1126/science.aad3503 | Population-level analysis of gut microbiome variation |
| https://doi.org/10.1038/s41467-019-13889-6 | PHD1 controls muscle mTORC1 in a hydroxylation-independent manner by stabilizing leucyl tRNA synthetase |
| https://doi.org/10.1038/nature18646 | Human gut microbes impact host serum metabolome and insulin sensitivity |
| https://doi.org/10.1126/science.1261605 | Eukaryotic plankton diversity in the sunlit ocean |
| https://doi.org/10.1038/nature15766 | Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota |
| https://doi.org/10.1016/j.cell.2012.04.024 | Mutational Processes Molding the Genomes of 21 Breast Cancers |
| https://doi.org/10.1038/nn.3028 | The toxic Aβ oligomer and Alzheimer's disease: an emperor in need of clothes |
| https://doi.org/10.1126/science.aad3369 | Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity |
| https://doi.org/10.1016/j.cell.2015.12.056 | The Cellular Phase of Alzheimer’s Disease |
| https://doi.org/10.1038/ncb2502 | Syndecan–syntenin–ALIX regulates the biogenesis of exosomes |
| https://doi.org/10.1038/s41591-018-0096-5 | Phenotype molding of stromal cells in the lung tumor microenvironment |
| https://doi.org/10.1038/nature10725 | The genetic basis of early T-cell precursor acute lymphoblastic leukaemia |
| https://doi.org/10.1016/j.cell.2013.06.037 | Role of PFKFB3-Driven Glycolysis in Vessel Sprouting |
| https://doi.org/10.1016/j.cell.2012.04.023 | The Life History of 21 Breast Cancers |
| https://doi.org/10.1038/s41586-018-0040-3 | Identification of the tumour transition states occurring during EMT |
| https://doi.org/10.1038/s41596-020-0336-2 | A scalable SCENIC workflow for single-cell gene regulatory network analysis |
| https://doi.org/10.1016/s1097-2765(01)00260-x | The Two-Handed E Box Binding Zinc Finger Protein SIP1 Downregulates E-Cadherin and Induces Invasion |
| https://doi.org/10.1016/j.cell.2020.01.015 | Single-Cell Transcriptome Atlas of Murine Endothelial Cells |
| https://doi.org/10.1073/pnas.1009843107 | Allele-specific copy number analysis of tumors |
| https://doi.org/10.1242/dmm.017400 | How informative is the mouse for human gut microbiota research? |
| https://doi.org/10.1038/nmeth.4185 | EV-TRACK: transparent reporting and centralizing knowledge in extracellular vesicle research |
| https://doi.org/10.1038/ni.3796 | α-ketoglutarate orchestrates macrophage activation through metabolic and epigenetic reprogramming |
| https://doi.org/10.1056/nejmoa1707278 | Idarucizumab for Dabigatran Reversal — Full Cohort Analysis |
| https://doi.org/10.1038/s41577-020-0343-0 | COVID-19: the vasculature unleashed |
| https://doi.org/10.1136/gutjnl-2015-309618 | Stool consistency is strongly associated with gut microbiota richness and composition, enterotypes and bacterial growth rates |
| https://doi.org/10.1136/jitc-2019-000337 | Consensus guidelines for the definition, detection and interpretation of immunogenic cell death |
| https://doi.org/10.1126/science.1262073 | Determinants of community structure in the global plankton interactome |
| https://doi.org/10.1038/cdd.2014.137 | Essential versus accessory aspects of cell death: recommendations of the NCCD 2015 |
| https://doi.org/10.1038/s41580-018-0086-y | Hippo–YAP/TAZ signalling in organ regeneration and regenerative medicine |
| https://doi.org/10.1371/journal.pcbi.1003731 | iRegulon: From a Gene List to a Gene Regulatory Network Using Large Motif and Track Collections |
| https://doi.org/10.1038/s41591-018-0164-x | Regional variation limits applications of healthy gut microbiome reference ranges and disease models |
| https://doi.org/10.1038/s41588-020-0636-z | Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer |
| https://doi.org/10.1038/s41568-020-00320-2 | The metabolism of cancer cells during metastasis |
| https://doi.org/10.1371/journal.pone.0128106 | Common Genetic Variation In Cellular Transport Genes and Epithelial Ovarian Cancer (EOC) Risk |
| https://doi.org/10.1038/nrd4161 | The two faces of Hippo: targeting the Hippo pathway for regenerative medicine and cancer treatment |
| https://doi.org/10.1038/mp.2011.154 | De novo CNV analysis implicates specific abnormalities of postsynaptic signalling complexes in the pathogenesis of schizophrenia |
| https://doi.org/10.1038/s41591-021-01323-8 | A single-cell map of intratumoral changes during anti-PD1 treatment of patients with breast cancer |
| https://doi.org/10.1038/nature16942 | Plankton networks driving carbon export in the oligotrophic ocean |
| https://doi.org/10.1038/ismej.2015.235 | Correlation detection strategies in microbial data sets vary widely in sensitivity and precision |
| https://doi.org/10.1038/s41422-020-0355-0 | A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling |
| https://doi.org/10.1038/cdd.2012.74 | PERK is required at the ER-mitochondrial contact sites to convey apoptosis after ROS-based ER stress |
| https://doi.org/10.1126/science.1261498 | Patterns and ecological drivers of ocean viral communities |
| https://doi.org/10.1126/science.abk2432 | Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly |
| https://doi.org/10.1016/j.cell.2007.08.038 | Anti-PlGF Inhibits Growth of VEGF(R)-Inhibitor-Resistant Tumors without Affecting Healthy Vessels |
| https://doi.org/10.1038/nrneurol.2009.218 | The secretases: enzymes with therapeutic potential in Alzheimer disease |
| https://doi.org/10.1126/scitranslmed.aak9679 | Combined antiangiogenic and anti–PD-L1 therapy stimulates tumor immunity through HEV formation |
| https://doi.org/10.1038/s41571-019-0203-7 | Navigating metabolic pathways to enhance antitumour immunity and immunotherapy |
| https://doi.org/10.1038/emboj.2011.497 | A novel pathway combining calreticulin exposure and ATP secretion in immunogenic cancer cell death |
| https://doi.org/10.1016/j.cell.2018.06.025 | Toward Minimal Residual Disease-Directed Therapy in Melanoma |
| https://doi.org/10.1016/j.devcel.2021.04.013 | Lipid metabolism in cancer: New perspectives and emerging mechanisms |
| https://doi.org/10.1016/0092-8674(89)90873-8 | Assembly and release of HIV-1 precursor Pr55gag virus-like particles from recombinant baculovirus-infected insect cells |
| https://doi.org/10.1038/cdd.2009.44 | Guidelines for the use and interpretation of assays for monitoring cell death in higher eukaryotes |
| https://doi.org/10.1161/01.cir.98.15.1487 | Oxidized LDL and Malondialdehyde-Modified LDL in Patients With Acute Coronary Syndromes and Stable Coronary Artery Disease |
| https://doi.org/10.1093/hmg/11.21.2615 | The disintegrin/metalloprotease ADAM 10 is essential for Notch signalling but not for alpha-secretase activity in fibroblasts |
| https://doi.org/10.1038/nrc.2016.140 | Interrogating open issues in cancer precision medicine with patient-derived xenografts |
| https://doi.org/10.1038/nature19081 | Tumour hypoxia causes DNA hypermethylation by reducing TET activity |
| https://doi.org/10.1016/j.ccell.2016.10.006 | Inhibition of the Glycolytic Activator PFKFB3 in Endothelium Induces Tumor Vessel Normalization, Impairs Metastasis, and Improves Chemotherapy |
| https://doi.org/10.1038/s41593-020-00789-y | Single-cell profiling of myeloid cells in glioblastoma across species and disease stage reveals macrophage competition and specialization |
| https://doi.org/10.1371/journal.pone.0109973 | MicroRNA Related Polymorphisms and Breast Cancer Risk |
| https://doi.org/10.1038/nature14362 | Fatty acid carbon is essential for dNTP synthesis in endothelial cells |
| https://doi.org/10.1038/ng.3242 | Genome-wide association analysis of more than 120,000 individuals identifies 15 new susceptibility loci for breast cancer |
| https://doi.org/10.1161/circresaha.116.302855 | Endothelial Cell Metabolism in Normal and Diseased Vasculature |
| https://doi.org/10.1038/s41590-019-0589-5 | CD36-mediated metabolic adaptation supports regulatory T cell survival and function in tumors |
| https://doi.org/10.1016/j.addr.2020.07.013 | Lipids and cancer: Emerging roles in pathogenesis, diagnosis and therapeutic intervention |
| https://doi.org/10.1007/s10456-018-9613-x | Consensus guidelines for the use and interpretation of angiogenesis assays |
| https://doi.org/10.1038/nature17161 | Melanoma addiction to the long non-coding RNA SAMMSON |
| https://doi.org/10.1038/nature16498 | FOXO1 couples metabolic activity and growth state in the vascular endothelium |
| https://doi.org/10.1161/circresaha.120.316851 | Basic and Therapeutic Aspects of Angiogenesis Updated |
| https://doi.org/10.1038/s41568-020-00302-4 | Non-genetic mechanisms of therapeutic resistance in cancer |
| https://doi.org/10.1016/j.ccr.2011.09.006 | Renal Cyst Formation in Fh1-Deficient Mice Is Independent of the Hif/Phd Pathway: Roles for Fumarate in KEAP1 Succination and Nrf2 Signaling |
| https://doi.org/10.1016/j.cell.2018.07.048 | Self-Maintaining Gut Macrophages Are Essential for Intestinal Homeostasis |
| https://doi.org/10.1152/physrev.00001.2017 | Endothelial Cell Metabolism |
| https://doi.org/10.1038/ncomms7683 | Decoding the regulatory landscape of melanoma reveals TEADS as regulators of the invasive cell state |
| https://doi.org/10.1002/(sici)1098-1128(199807)18:4<225::aid-med2>3.0.co;2-x | A review of the plants of the genusPhyllanthus: Their chemistry, pharmacology, and therapeutic potential |
| https://doi.org/10.1016/j.cmet.2013.11.008 | Partial and Transient Reduction of Glycolysis by PFKFB3 Blockade Reduces Pathological Angiogenesis |
| https://doi.org/10.1172/jci84427 | The impact of hypoxia on tumor-associated macrophages |
| https://doi.org/10.12688/f1000research.9050.1 | CoNet app: inference of biological association networks using Cytoscape |
| https://doi.org/10.1038/s41592-019-0367-1 | cisTopic: cis-regulatory topic modeling on single-cell ATAC-seq data |
| https://doi.org/10.1016/j.cmet.2020.05.004 | Endothelial Lactate Controls Muscle Regeneration from Ischemia by Inducing M2-like Macrophage Polarization |
| https://doi.org/10.1093/femsre/fuv048 | Computational approaches to predict bacteriophage–host relationships |
| https://doi.org/10.1038/nmicrobiol.2016.88 | Species–function relationships shape ecological properties of the human gut microbiome |
| https://doi.org/10.1038/nature14407 | MET is required for the recruitment of anti-tumoural neutrophils |
| https://doi.org/10.1038/emboj.2012.79 | The mechanism of γ-Secretase dysfunction in familial Alzheimer disease |
| https://doi.org/10.1016/j.cmet.2016.09.008 | Macrophage Metabolism Controls Tumor Blood Vessel Morphogenesis and Metastasis |
| https://doi.org/10.1038/s41577-022-00694-4 | Immunomodulation by endothelial cells — partnering up with the immune system? |
| https://doi.org/10.1038/s41579-020-0364-5 | Tara Oceans: towards global ocean ecosystems biology |
| https://doi.org/10.1038/s41556-019-0360-z | Patient-derived organoids from endometrial disease capture clinical heterogeneity and are amenable to drug screening |
| https://doi.org/10.1002/emmm.201201974 | Alteration of the micro |
| https://doi.org/10.1038/s41586-019-0904-1 | Evidence for an alternative fatty acid desaturation pathway increasing cancer plasticity |
| https://doi.org/10.1038/nm.4135 | p53 induces formation of NEAT1 lncRNA-containing paraspeckles that modulate replication stress response and chemosensitivity |
| https://doi.org/10.1038/ng.3221 | Analysis of the genetic phylogeny of multifocal prostate cancer identifies multiple independent clonal expansions in neoplastic and morphologically normal prostate tissue |
| https://doi.org/10.1016/j.ccell.2019.12.001 | An Integrated Gene Expression Landscape Profiling Approach to Identify Lung Tumor Endothelial Cell Heterogeneity and Angiogenic Candidates |
| https://doi.org/10.1038/nature10525 | A vascular niche and a VEGF–Nrp1 loop regulate the initiation and stemness of skin tumours |
| https://doi.org/10.1016/j.cmet.2019.08.011 | Hallmarks of Endothelial Cell Metabolism in Health and Disease |